Zeisel Brain Query Single-Cell RNA-Seq Dataset

This dataset contains the processed query dataset from the Zeisel mouse brain data, for use alongside zeisel_reference_data.

Usage

zeisel_query_data

Format

An object of class SingleCellExperiment with 230 rows and 902 columns.

Source

The Zeisel mouse brain dataset, available through the scRNAseq package.

Details

See zeisel_reference_data for the processing steps shared by both datasets.

References

Zeisel A, et al. (2015). Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq. Science 347(6226):1138-42.

See also

Use data("zeisel_query_data") to load and access the resulting query dataset, and data("zeisel_reference_data") for comparison with the reference dataset.

Examples

# Load and explore the Zeisel query dataset
data("zeisel_query_data")