Reference

Last updated on 2024-09-24 | Edit this page

Literature Reference

  1. Borella, Matteo, Graziano Martello, Davide Risso, and Chiara Romualdi. “PsiNorm: A Scalable Normalization for Single-Cell RNA-Seq Data.” Bioinformatics 38, no. 1 (2022): 164–72.
  2. Cole, Michael B, Davide Risso, Allon Wagner, David DeTomaso, John Ngai, Elizabeth Purdom, Sandrine Dudoit, and Nir Yosef. “Performance Assessment and Selection of Normalization Procedures for Single-Cell RNA-Seq.” Cell Systems 8, no. 4 (2019): 315–28.
  3. Lun, Aaron T, Karsten Bach, and John C Marioni. “Pooling across Cells to Normalize Single-Cell RNA Sequencing Data with Many Zero Counts.” Genome Biology 17, no. 1 (2016): 1–14.
  4. Lun, Aaron TL, Samantha Riesenfeld, Tallulah Andrews, Tomas Gomes, John C Marioni, and others. “EmptyDrops: Distinguishing Cells from Empty Droplets in Droplet-Based Single-Cell RNA Sequencing Data.” Genome Biology 20, no. 1 (2019): 1–9.
  5. Monaco, Gianni, Bernett Lee, Weili Xu, Seri Mustafah, You Yi Hwang, Christophe Carré, Nicolas Burdin, et al. “RNA-Seq Signatures Normalized by mRNA Abundance Allow Absolute Deconvolution of Human Immune Cell Types.” Cell Rep. 26, no. 6 (February 2019): 1627-1640.e7.
  6. Vallejos, Catalina A, Davide Risso, Antonio Scialdone, Sandrine Dudoit, and John C Marioni. “Normalizing Single-Cell RNA Sequencing Data: Challenges and Opportunities.” Nature Methods 14, no. 6 (2017): 565–71.